Amyloid PDB structure set
Конференцијски прилог (Објављена верзија)
Метаподаци
Приказ свих података о документуАпстракт
Amyloids are insoluble proteins of a cross-β structure found as deposits in many diseases. They are largely examined structurally, but there is a lack of a unique structural database for amyloid proteins resolved with atomic resolution. Here, we present a constructed set of amyloid structures found in the Protein Data Bank based on keyword criterion as well as structural features of amyloids described in literature. An amyloid consists of parallel self-assembled β-sheets or coils. The searching filter was performed by python programming. The total number of structures is 109 and it keeps increasing. This database can help further structural general and statistical analysis
of amyloids.
Кључне речи:
Amyloids / Protein Data Bank / datasetИзвор:
Book of Abstracts - 7th Conference of the Young Chemists of Serbia, 2.11.2019, Belgrade, 2019, 152-152Издавач:
- Serbian Chemical Society
Финансирање / пројекти:
- Нековалентне интеракције pi-система и њихова улога у молекулском препознавању (RS-MESTD-Basic Research (BR or ON)-172065)
Институција/група
IHTMTY - CONF AU - Stanković, Ivana M. AU - Hall, Michael B. AU - Zarić, Snežana D. PY - 2019 UR - https://cer.ihtm.bg.ac.rs/handle/123456789/6260 AB - Amyloids are insoluble proteins of a cross-β structure found as deposits in many diseases. They are largely examined structurally, but there is a lack of a unique structural database for amyloid proteins resolved with atomic resolution. Here, we present a constructed set of amyloid structures found in the Protein Data Bank based on keyword criterion as well as structural features of amyloids described in literature. An amyloid consists of parallel self-assembled β-sheets or coils. The searching filter was performed by python programming. The total number of structures is 109 and it keeps increasing. This database can help further structural general and statistical analysis of amyloids. PB - Serbian Chemical Society C3 - Book of Abstracts - 7th Conference of the Young Chemists of Serbia, 2.11.2019, Belgrade T1 - Amyloid PDB structure set SP - 152 EP - 152 UR - https://hdl.handle.net/21.15107/rcub_cer_6260 ER -
@conference{ author = "Stanković, Ivana M. and Hall, Michael B. and Zarić, Snežana D.", year = "2019", abstract = "Amyloids are insoluble proteins of a cross-β structure found as deposits in many diseases. They are largely examined structurally, but there is a lack of a unique structural database for amyloid proteins resolved with atomic resolution. Here, we present a constructed set of amyloid structures found in the Protein Data Bank based on keyword criterion as well as structural features of amyloids described in literature. An amyloid consists of parallel self-assembled β-sheets or coils. The searching filter was performed by python programming. The total number of structures is 109 and it keeps increasing. This database can help further structural general and statistical analysis of amyloids.", publisher = "Serbian Chemical Society", journal = "Book of Abstracts - 7th Conference of the Young Chemists of Serbia, 2.11.2019, Belgrade", title = "Amyloid PDB structure set", pages = "152-152", url = "https://hdl.handle.net/21.15107/rcub_cer_6260" }
Stanković, I. M., Hall, M. B.,& Zarić, S. D.. (2019). Amyloid PDB structure set. in Book of Abstracts - 7th Conference of the Young Chemists of Serbia, 2.11.2019, Belgrade Serbian Chemical Society., 152-152. https://hdl.handle.net/21.15107/rcub_cer_6260
Stanković IM, Hall MB, Zarić SD. Amyloid PDB structure set. in Book of Abstracts - 7th Conference of the Young Chemists of Serbia, 2.11.2019, Belgrade. 2019;:152-152. https://hdl.handle.net/21.15107/rcub_cer_6260 .
Stanković, Ivana M., Hall, Michael B., Zarić, Snežana D., "Amyloid PDB structure set" in Book of Abstracts - 7th Conference of the Young Chemists of Serbia, 2.11.2019, Belgrade (2019):152-152, https://hdl.handle.net/21.15107/rcub_cer_6260 .