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Influence of hydrogen bonds on edge-to-face interactions between pyridine molecules

Authorized Users Only
2018
Authors
Andrić, Jelena M.
Antonijević, Ivana
Janjić, Goran
Zarić, Snežana D.
Article (Published version)
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Abstract
Edge-to-face interactions between two pyridine molecules and the influence of simultaneous hydrogen bonding of one or both of the pyridines to water on those interactions were studied by analyzing data from ab initio calculations. The results show that the edge-to-face interactions of pyridine dimers that are hydrogen bonded to water are generally stronger than those of non-H-bonded pyridine dimers, especially when the donor pyridine forms a hydrogen bond. The binding energy of the most stable edge-to-face interacting H-bonded pyridine dimer is -5.05 kcal/mol, while that for the most stable edge-to-face interacting non-H-bonded pyridine dimer is -3.64 kcal/mol. The interaction energy data obtained in this study cannot be explained solely by the differences in electrostatic potential between pyridine and the pyridine-water dimer. However, the calculated cooperative effect can be predicted using electrostatic potential maps.
Keywords:
Noncovalent interactions / Pyridine / Hydrogen bond / Ab initio calculations / Electrostatic potential
Source:
Journal of Molecular Modeling, 2018, 24, 3, 60-
Publisher:
  • Springer, New York
Funding / projects:
  • Noncovalent interactions of pi-systems and their role in molecular recognition (RS-172065)

DOI: 10.1007/s00894-017-3570-y

ISSN: 1610-2940

PubMed: 29464387

WoS: 000426730900001

Scopus: 2-s2.0-85042315589
[ Google Scholar ]
4
2
URI
https://cer.ihtm.bg.ac.rs/handle/123456789/2333
Collections
  • Radovi istraživača / Researchers' publications
Institution/Community
IHTM
TY  - JOUR
AU  - Andrić, Jelena M.
AU  - Antonijević, Ivana
AU  - Janjić, Goran
AU  - Zarić, Snežana D.
PY  - 2018
UR  - https://cer.ihtm.bg.ac.rs/handle/123456789/2333
AB  - Edge-to-face interactions between two pyridine molecules and the influence of simultaneous hydrogen bonding of one or both of the pyridines to water on those interactions were studied by analyzing data from ab initio calculations. The results show that the edge-to-face interactions of pyridine dimers that are hydrogen bonded to water are generally stronger than those of non-H-bonded pyridine dimers, especially when the donor pyridine forms a hydrogen bond. The binding energy of the most stable edge-to-face interacting H-bonded pyridine dimer is -5.05 kcal/mol, while that for the most stable edge-to-face interacting non-H-bonded pyridine dimer is -3.64 kcal/mol. The interaction energy data obtained in this study cannot be explained solely by the differences in electrostatic potential between pyridine and the pyridine-water dimer. However, the calculated cooperative effect can be predicted using electrostatic potential maps.
PB  - Springer, New York
T2  - Journal of Molecular Modeling
T1  - Influence of hydrogen bonds on edge-to-face interactions between pyridine molecules
VL  - 24
IS  - 3
SP  - 60
DO  - 10.1007/s00894-017-3570-y
ER  - 
@article{
author = "Andrić, Jelena M. and Antonijević, Ivana and Janjić, Goran and Zarić, Snežana D.",
year = "2018",
abstract = "Edge-to-face interactions between two pyridine molecules and the influence of simultaneous hydrogen bonding of one or both of the pyridines to water on those interactions were studied by analyzing data from ab initio calculations. The results show that the edge-to-face interactions of pyridine dimers that are hydrogen bonded to water are generally stronger than those of non-H-bonded pyridine dimers, especially when the donor pyridine forms a hydrogen bond. The binding energy of the most stable edge-to-face interacting H-bonded pyridine dimer is -5.05 kcal/mol, while that for the most stable edge-to-face interacting non-H-bonded pyridine dimer is -3.64 kcal/mol. The interaction energy data obtained in this study cannot be explained solely by the differences in electrostatic potential between pyridine and the pyridine-water dimer. However, the calculated cooperative effect can be predicted using electrostatic potential maps.",
publisher = "Springer, New York",
journal = "Journal of Molecular Modeling",
title = "Influence of hydrogen bonds on edge-to-face interactions between pyridine molecules",
volume = "24",
number = "3",
pages = "60",
doi = "10.1007/s00894-017-3570-y"
}
Andrić, J. M., Antonijević, I., Janjić, G.,& Zarić, S. D.. (2018). Influence of hydrogen bonds on edge-to-face interactions between pyridine molecules. in Journal of Molecular Modeling
Springer, New York., 24(3), 60.
https://doi.org/10.1007/s00894-017-3570-y
Andrić JM, Antonijević I, Janjić G, Zarić SD. Influence of hydrogen bonds on edge-to-face interactions between pyridine molecules. in Journal of Molecular Modeling. 2018;24(3):60.
doi:10.1007/s00894-017-3570-y .
Andrić, Jelena M., Antonijević, Ivana, Janjić, Goran, Zarić, Snežana D., "Influence of hydrogen bonds on edge-to-face interactions between pyridine molecules" in Journal of Molecular Modeling, 24, no. 3 (2018):60,
https://doi.org/10.1007/s00894-017-3570-y . .

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