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dc.creatorMalkov, Saga N.
dc.creatorZivkovic, Miodrag V.
dc.creatorBeljanski, Milos V.
dc.creatorStojanović, Srđan
dc.creatorZarić, Snežana D.
dc.date.accessioned2019-01-30T17:20:34Z
dc.date.available2019-01-30T17:20:34Z
dc.date.issued2009
dc.identifier.issn1572-3887
dc.identifier.urihttp://cer.ihtm.bg.ac.rs/handle/123456789/550
dc.description.abstractUsing the data from Protein Data Bank the correlations of primary and secondary structures of proteins were analyzed. The correlation values of the amino acids and the eight secondary structure types were calculated, where the position of the amino acid and the position in sequence with the particular secondary structure differ at most 25. The diagrams describing these results indicate that correlations are significant at distances between -9 and 10. The results show that the substituents on C beta or C gamma atoms of amino acid play major role in their preference for particular secondary structure at the same position in the sequence, while the polarity of amino acid has significant influence on alpha-helices and strands at some distance in the sequence. The diagrams corresponding to polar amino acids are noticeably asymmetric. The diagrams point out the exchangeability of residues in the proteins; the amino acids with similar diagrams have similar local folding requirements.en
dc.publisherSpringer, New York
dc.relationinfo:eu-repo/grantAgreement/MESTD/MPN2006-2010/144030/RS//
dc.relationinfo:eu-repo/grantAgreement/MESTD/MPN2006-2010/142037/RS//
dc.rightsrestrictedAccess
dc.sourceProtein Journal
dc.subjectProteinen
dc.subjectAmino aciden
dc.subjectProtein secondary structureen
dc.subjectStatistical correlationen
dc.titleA Reexamination of Correlations of Amino Acids with Particular Secondary Structuresen
dc.typearticle
dc.rights.licenseARR
dcterms.abstractЗарић, Снежана Д.; Малков, Сага Н.; Зивковиц, Миодраг В.; Стојановић, Срђан; Бељански, Милос В.;
dc.citation.volume28
dc.citation.issue2
dc.citation.spage74
dc.citation.epage86
dc.citation.other28(2): 74-86
dc.citation.rankM23
dc.identifier.pmid19280326
dc.identifier.doi10.1007/s10930-009-9166-3
dc.identifier.rcubConv_2329
dc.identifier.scopus2-s2.0-63449106826
dc.identifier.wos000266563000003
dc.type.versionpublishedVersion


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